1. * Package: sci-libs/adolc-2.5.0
  2. * Repository: gentoo
  3. * Maintainer: sci@gentoo.org
  4. * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU
  5. * FEATURES: sandbox test userpriv usersandbox
  6. Installed LAPACK for library directory lib64
  7. [1] reference *
  8. Installed BLAS for library directory lib64
  9. [1] reference *
  10. Installed CBLAS for library directory lib64
  11. [1] gsl
  12. [2] reference *
  13. >>> Unpacking source...
  14. >>> Unpacking ADOL-C-2.5.0.tgz to /tmp/portage/sci-libs/adolc-2.5.0/work
  15. >>> Source unpacked in /tmp/portage/sci-libs/adolc-2.5.0/work
  16. >>> Preparing source in /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0 ...
  17. * Applying adolc-2.5.0-no-colpack.patch ...
  18. [ ok ]
  19. * Applying adolc-2.5.0-pkgconfig-no-ldflags.patch ...
  20. [ ok ]
  21. * Running eautoreconf in '/tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0' ...
  22. * Running libtoolize --copy --force --automake ...
  23. [ ok ]
  24. * Running aclocal -I autoconf ...
  25. [ ok ]
  26. * Running autoconf ...
  27. [ ok ]
  28. * Running autoheader ...
  29. [ ok ]
  30. * Running automake --add-missing --copy --force-missing ...
  31. [ ok ]
  32. * Running elibtoolize in: ADOL-C-2.5.0/
  33. * Running elibtoolize in: ADOL-C-2.5.0/autoconf/
  34. * Applying portage/1.2.0 patch ...
  35. * Applying sed/1.5.6 patch ...
  36. >>> Source prepared.
  37. >>> Configuring source in /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0 ...
  38. >>> Working in BUILD_DIR: "/tmp/portage/sci-libs/adolc-2.5.0/work/adolc-2.5.0_build"
  39. * econf: updating ADOL-C-2.5.0/autoconf/config.sub with /usr/share/gnuconfig/config.sub
  40. * econf: updating ADOL-C-2.5.0/autoconf/config.guess with /usr/share/gnuconfig/config.guess
  41. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --libdir=/usr/lib64 --docdir=/usr/share/doc/adolc-2.5.0 --enable-shared --disable-static --disable-ampi --disable-sparse --without-colpack
  42. configure: loading site script /usr/share/config.site
  43. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 40: /usr/share/config.site: [[: Permission denied
  44. checking for a BSD-compatible install... /usr/bin/install -c
  45. checking whether build environment is sane... yes
  46. checking for a thread-safe mkdir -p... /bin/mkdir -p
  47. checking for gawk... gawk
  48. checking whether make sets $(MAKE)... yes
  49. checking whether make supports nested variables... yes
  50. checking whether to enable maintainer-specific portions of Makefiles... no
  51. checking whether make supports nested variables... (cached) yes
  52. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 3469: test: x-O2 -pipe -ggdb -march=native -ftracer -frecord-gcc-switches: unexpected operator
  53. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 3474: test: x-O2 -pipe -ggdb -march=native -ftracer -frecord-gcc-switches: unexpected operator
  54. checking whether to build ADOL-C with adjoinable MPI (AMPI) support... no
  55. checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
  56. checking whether the C++ compiler works... yes
  57. checking for C++ compiler default output file name... a.out
  58. checking for suffix of executables...
  59. checking whether we are cross compiling... no
  60. checking for suffix of object files... o
  61. checking whether we are using the GNU C++ compiler... yes
  62. checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
  63. checking for style of include used by make... GNU
  64. checking dependency style of x86_64-pc-linux-gnu-g++... none
  65. checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
  66. checking whether we are using the GNU C compiler... yes
  67. checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
  68. checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
  69. checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together... yes
  70. checking dependency style of x86_64-pc-linux-gnu-gcc... none
  71. checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
  72. checking whether ln -s works... yes
  73. checking whether make sets $(MAKE)... (cached) yes
  74. checking build system type... x86_64-pc-linux-gnu
  75. checking host system type... x86_64-pc-linux-gnu
  76. checking how to print strings... printf
  77. checking for a sed that does not truncate output... /bin/sed
  78. checking for grep that handles long lines and -e... /bin/grep
  79. checking for egrep... /bin/grep -E
  80. checking for fgrep... /bin/grep -F
  81. checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
  82. checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
  83. checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
  84. checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
  85. checking the maximum length of command line arguments... 1572864
  86. checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
  87. checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
  88. checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
  89. checking for x86_64-pc-linux-gnu-objdump... objdump
  90. checking how to recognize dependent libraries... pass_all
  91. checking for x86_64-pc-linux-gnu-dlltool... dlltool
  92. checking how to associate runtime and link libraries... printf %s\n
  93. checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar
  94. checking for archiver @FILE support... @
  95. checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
  96. checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
  97. checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
  98. checking for sysroot... no
  99. checking for a working dd... /bin/dd
  100. checking how to truncate binary pipes... /bin/dd bs=4096 count=1
  101. checking for x86_64-pc-linux-gnu-mt... no
  102. checking for mt... mt
  103. checking if mt is a manifest tool... no
  104. checking for ANSI C header files... yes
  105. checking for sys/types.h... yes
  106. checking for sys/stat.h... yes
  107. checking for stdlib.h... yes
  108. checking for string.h... yes
  109. checking for memory.h... yes
  110. checking for strings.h... yes
  111. checking for inttypes.h... yes
  112. checking for stdint.h... yes
  113. checking for unistd.h... yes
  114. checking for dlfcn.h... yes
  115. checking for objdir... .libs
  116. checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
  117. checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
  118. checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
  119. checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
  120. checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
  121. checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
  122. checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
  123. checking whether -lc should be explicitly linked in... no
  124. checking dynamic linker characteristics... GNU/Linux ld.so
  125. checking how to hardcode library paths into programs... immediate
  126. checking whether stripping libraries is possible... yes
  127. checking if libtool supports shared libraries... yes
  128. checking whether to build shared libraries... yes
  129. checking whether to build static libraries... no
  130. checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
  131. checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
  132. checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
  133. checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
  134. checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
  135. checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
  136. checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
  137. checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
  138. checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
  139. checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
  140. checking dynamic linker characteristics... (cached) GNU/Linux ld.so
  141. checking how to hardcode library paths into programs... immediate
  142. checking size of void *... 8
  143. checking for __builtin_expect... yes
  144. checking for ANSI C header files... (cached) yes
  145. checking whether time.h and sys/time.h may both be included... yes
  146. checking for stdbool.h that conforms to C99... yes
  147. checking for _Bool... yes
  148. checking stddef.h usability... yes
  149. checking stddef.h presence... yes
  150. checking for stddef.h... yes
  151. checking for stdlib.h... (cached) yes
  152. checking stdio.h usability... yes
  153. checking stdio.h presence... yes
  154. checking for stdio.h... yes
  155. checking for string.h... (cached) yes
  156. checking for unistd.h... (cached) yes
  157. checking sys/timeb.h usability... yes
  158. checking sys/timeb.h presence... yes
  159. checking for sys/timeb.h... yes
  160. checking for an ANSI C-conforming const... yes
  161. checking for inline... inline
  162. checking for size_t... yes
  163. checking whether struct tm is in sys/time.h or time.h... time.h
  164. checking for stdlib.h... (cached) yes
  165. checking for GNU libc compatible malloc... yes
  166. checking for stdlib.h... (cached) yes
  167. checking for GNU libc compatible realloc... yes
  168. checking for library containing pow... -lm
  169. checking for floor... yes
  170. checking for fmax... yes
  171. checking for fmin... yes
  172. checking for ftime... yes
  173. checking for pow... yes
  174. checking for sqrt... yes
  175. checking for strchr... yes
  176. checking for strtol... yes
  177. checking for trunc... yes
  178. checking whether to use calloc or malloc for memory allocation... calloc
  179. checking whether to enable atrig/erf functions... no
  180. checking whether to use 32-bit or 64-bit locations... 32-bit
  181. checking whether to use single or double precision... double
  182. checking whether to enable advanced branching operations... no
  183. checking whether to use ADOL-C debug mode... no
  184. checking whether to use ADOL-C hard debug mode... no
  185. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17199: test: xno: unexpected operator
  186. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17206: test: xno: unexpected operator
  187. checking whether the default adouble constructor should initialize the value to 0... yes
  188. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17230: test: xyes: unexpected operator
  189. checking whether the adouble variables have a late initialize option for functions like malloc/realloc... no
  190. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17254: test: xno: unexpected operator
  191. checking whether errno is thread save... no
  192. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17278: test: xno: unexpected operator
  193. checking which flag to use to enable OpenMP... none
  194. checking whether to build sparse drivers... no
  195. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17326: /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: D[0]=no/lib64: not found
  196. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17327: /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: D[1]=no/lib: not found
  197. /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: 17364: /tmp/portage/sci-libs/adolc-2.5.0/work/ADOL-C-2.5.0/configure: Syntax error: Bad for loop variable
  198. !!! Please attach the following file when seeking support:
  199. !!! /tmp/portage/sci-libs/adolc-2.5.0/work/adolc-2.5.0_build/config.log
  200. * ERROR: sci-libs/adolc-2.5.0::gentoo failed (configure phase):
  201. * econf failed
  202. *
  203. * Call stack:
  204. * ebuild.sh, line 93: Called src_configure
  205. * environment, line 3120: Called autotools-utils_src_configure
  206. * environment, line 727: Called econf '--docdir=/usr/share/doc/adolc-2.5.0' '--enable-shared' '--disable-static' '--disable-ampi' '--disable-sparse' '--without-colpack'
  207. * phase-helpers.sh, line 584: Called die
  208. * The specific snippet of code:
  209. * die "econf failed"
  210. *
  211. * If you need support, post the output of `emerge --info '=sci-libs/adolc-2.5.0::gentoo'`,
  212. * the complete build log and the output of `emerge -pqv '=sci-libs/adolc-2.5.0::gentoo'`.
  213. sed: couldn't open temporary file /etc/portage/package.mask/sedrurjqa: Permission denied